Korea June 17-20, 2014 The 12th KJC Bioinformatics Training Course and Symposium, Jeju, Korea

Announcement

2014 photo

We are pleased to announce that "The 12th Korea-Japan-China Bioinformatics Training Course and Symposium" will be held in Jeju, Korea on June 17-20, 2014. In addition the training course given by lecturers, there will also be a poster session by trainees as well as a symposium session by both lecturers and selected trainees. We hope that the course will be helpful for your ongoing and future careers in bioinformatics.

Outline

Venue

Ocean Suites Hotel (home page: English   Chinese   Japanese   Korean) in Jeju Island

Schedule

Organizers

Trainees

Cost

The attendance fee is free. Local lodging and meals will also be provided by Korea, the hosting country of this year.

What to Bring

Trainees are encouraged to bring their own laptop since lecture notes will be distributed in USB memory stick.

Program

All the program activities are held in the second floor of Ocean Suites Hotel.

Program outline PDF icon

Tuesday, June 17, 2014: Registration and Reception
-18:00 Hotel check-in and registration Lobby
18:00-18:30 Opening ceremony Canola Hall
18:30-20:00 Reception dinner buffet
Wednesday, June 18, 2014: Training Course Day 1
-09:00 Breakfast Blue Ocean Cafeteria
09:00-09:30 Poster mounting Camelia Hall
09:30-10:40 PDF icon Human disease network analysis reveals the clinical severity of genetic disorders
Sanguk Kim
POSTECH (Pohang University of Science and Technology)
10:40-11:50 Statistical concepts and modeling methods in bioinformatics
Dougu Nam
UNIST (Ulsan National Institute of Science and Technology)
11:50-12:00 Taking group photo
12:00-13:30 Lunch Blue Ocean Cafeteria
13:30-14:40 PDF icon Computational comparative genomics and its applications
Jaebum Kim
Konkuk University
Camelia Hall
14:40-15:50 PDF icon Gene-set analyses of genome-wide association studies
Sangsoo Kim
Soongsil University
15:50-16:00 Break
16:00-18:00 Poster session
18:00-19:30 Dinner Sanho Abalone Restaurant (10 minute walk from hotel)
Thursday, June 19, 2014: Training Course Day 2
-09:30 Breakfast Blue Ocean Cafeteria
09:30-10:40 PDF icon Whole genome sequencing of six dog breeds from continuous altitudes reveals adaptation to high-altitude hypoxia
Yixue Li
Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences
Camelia Hall
10:40-11:50 PDF icon Noncoding RNA and Rnomics
Runsheng Chen
Institute of Biophysics, Chinese Academy of Sciences
11:50-13:20 Lunch Blue Ocean Cafeteria
13:20-14:30 PDF icon Introduction of DDBJ and microbe genome analysis pipelines
Yasukazu Nakamura
DDBJ, NIG (National Institute of Genetics)
Camelia Hall
14:30-15:40 PDF icon Comparison and classification of protein structures
Akira Kinjo
PDBj, Osaka University
15:40-15:50 Break
15:50-17:00 PDF icon Bioinformatics in translational medicine
Lu Xie
SCBIT (Shanghai Center for Bioinformation Technology)
17:00-18:10 PDF icon Introduction to evolutionary genomics
Naruya Saitou
NIG (National Institute of Genetics)
18:10-19:30 Dinner buffet Blue Ocean Cafeteria
19:30-20:00 Steering Committee Meeting (members only) Blue Ocean Cafeteria
Friday, June 20, 2014: Symposium
-09:00 Breakfast Blue Ocean Cafeteria
09:00-09:40 PDF icon How to analyze Big Data: Marine metagenomics and the diversity of microorganism
Takashi Gojobori
NIG (National Institute of Genetics), KAUST (King Abdullah University of Science and Technology)
Camelia Hall
09:40-10:20 PDF icon Collapsing the 10271 16S rRNA sequences based All-Species Living Tree
Bailin Hao
Fudan University
Supplementary material: All-Spacies Living Tree Project Rel 115 PDF icon
Demo URL: LVTreeViewer and CVTree3
10:20-10:40 Trainee presentation 1
Ryong Nam Kim, Seoul National University
An integrated analysis of copy number alteration and global gene expression reveals potential oncogenes underlying stomach cancer
10:40-11:00 Trainee presentation 2
Kyuhong Choe, Seoul National University
PDF icon Protein domain prediction and modeling unit determination for protein structure prediction by using sequence and structure information
11:00-11:10 Break
11:10-11:30 Trainee presentation 3
Baofeng Lian
SCBIT (Shanghai Center for Bioinformation Technology)
Comparative analysis of protein interaction networks in ICC and HCC
11:30-11:50 Trainee presentation 4
Kun Zhang
Institute of Computing Technology, Chinese Academy of Science
PDF icon Identifying novel genes and gene refinements in Thermoanaerobacter tengcongensis
11:50-12:10 Trainee presentation 5
Nilmini Hettiarachchi
The Graduate University for Advanced Studies
PDF icon Lineage specific conserved noncoding sequences of plant genomes
12:10-12:30 Trainee presentation 6
Morteza Mahmoudisaber
The University of Tokyo
PDF icon Toward deciphering hominod-specific genomic changes which determine their specific phenotypes
12:30-14:00 Lunch Blue Ocean Cafeteria
14:00-16:30 Poster session Camelia Hall
16:30-17:00 Closing ceremony
Saturday, June 21, 2014: Departure

Poster

Poster presentation (Trainees)

Lecturers

Korea
Dr. Sanguk Kim POSTECH (Pohang University of Science and Technology) Human disease network analysis reveals the clinical severity of genetic disorders
Dr. Jaebum Kim Konkuk University Computational comparative genomics and its applications
Dr. Dougu Nam UNIST (Ulsan National Institute of Science and Technology) Statistical concepts and modeling methods in bioinformatics
Dr. Sangsoo Kim Soongsil University Gene-set analyses of genome-wide association studies
Japan
Dr. Yasukazu Nakamura DDBJ, NIG (National Institute of Genetics) Introduction of DDBJ and microbe genome analysis pipelines
Dr. Akira Kinjo PDBj, Osaka University Comparison and classification of protein structures
Dr. Naruya Saitou NIG (National Institute of Genetics) Introduction to evolutionary genomics
Dr. Takashi Gojobori NIG (National Institute of Genetics)
KAUST (King Abdullah University of Science and Technology)
How to analyze Big Data: Marine metagenomics and the diversity of microorganism
China
Dr. Runsheng Chen Institute of Biophysics, Chinese Academy of Sciences Noncoding RNA and Rnomics
Dr. Yixue Li Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences Whole genome sequencing of six dog breeds from continuous altitudes reveals adaptation to high-altitude hypoxia
Dr. Lu Xie SCBIT (Shanghai Center for Bioinformation Technology) Bioinformatics in translational medicine
Dr. Bailin Hao Fudan University Collapsing the 10271 16S rRNA sequences based All-Species Living Tree

Travel Information

Direction from Jeju International Airport to Ocean Suites Hotel

Ocean Suites Hotel takes just 10 minutes and 5,000 Won (500 Yen, 30 Yuan) by taxi from the Airport.

(1) Exit the terminal building through arrival gate 5, which will be directly in front of you after baggage claim (2) Walk across the pedestrian crosswalk (3) Just get into a taxi (4) Say to the driver "Ocean Suites Hotel" or bring the printout of this to show him
Taxi1 Taxi2 Taxi3 Taxi4

Shopping

Direction to emart e-mart jeju store (a supermarket, food court, and discount store) is just a block away from the hotel. Shopping time: 10:00 - 23:00

In addition, there is a 24-hour convenience store in the hotel.

Sightseeing Information

One-day guided bus tour

Yeha_tour Yeha Tour offers a one-day guided bus tour for 79,000 Won (480 Yuan, 7,800 Yen). They will pick you up at Ocean Suites Hotel and drop you off at the airport. The guide is offered in English or Chinese (no Japanese yet). For inquiry, visit their homepage in English or Chinese.

Places around the hotel in walking distance

Around the hotel

Other nearby places

Jeju Folklore and Natural History Museum (English Chinese) is located 10 minutes from hotel by taxi.
museum1 museum2 museum3 museum4

Photos

June 17th, 2014

Day1

Download zip 1

Download zip 2

June 18th, 2014

Day2

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June 19th, 2014

Day3

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June 20th, 2014

Day4

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