China April 20-23, 2010 The 9th CJK Bioinformatics Training Course and Symposium, Shanghai, China

Original website: http://cjk-bioinfo-09.scbit.org

Announcement

We are pleased to announce that “The 9th China-Japan-Korea Bioinformatics Training Course and Bioinformatics Symposium” will be held at Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences(CAS), Shanghai, China, from April 20th to April 23rd, 2010.

Outline

Venue

Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 319 Yueyang Road, Shanghai,China

Period

Organizers

Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences(SIBS)
Shanghai Center for Bioinformation Technology (SCBIT)
Japan Science and Technology Agency (JST)
Center for Information Biology and DDBJ (CIB-DDBJ) at the National Institute of Genetics (NIG)
Korean BioInformation Center (KOBIC) at the Korea Research Institute of Bioscience and Biotechnology (KRIBB)

Trainees

Fees

The attendance fee is free. Moreover, the trainees are covered with travel expenses, lodging and meals. He/She is also provided with a PC linked with Internet during the course.

Notes

CAS: Chinese Academy of Sciences
SIBS: Shanghai Institutes for Biological Sciences, CAS
FU: Fudan University
SJTU: Shanghai Jiaotong University
ICT: Institute of Computing Technology, CAS
NIG: National Institute of Genetics
OU: Osaka University
TMU: Tokyo Metropolitan University
BIRC: Biomedicinal Information Research Center
AIST : National Institute of Advanced Industrial Science and Technology
KOBIC: Korean Bioinformation Center
KAIST: Korea Advanced Institute of Science and Technology
POSTECH: Pohang University of Science and Technology
SSU: Soongsil University

Lecturers

China
Dr. Yixue Li Shanghai Institutes for Biological Sciences, CAS symposium
Dr. Yang Zhong Fudan University symposium
Dr. Luonan Chen Shanghai Institutes for Biological Sciences, CAS training course, symposium
Dr. Aiping Lv Shanghai Institutes for Biological Sciences, CAS training course
Dr. Hongbin Shen Shanghai Jiaotong University symposium
Dr. Xuan Li Shanghai Institutes for Biological Sciences, CAS training course
Dr. Chaochun Wei Shanghai Jiaotong University training course
Dr. Yan Fu Institute of Computing Technology, CAS training course
Japan
Dr. Takashi Gojobori National Institute of Genetics symposium
Dr. Yoshio Tateno National Institute of Genetics symposium
Dr. Haruki Nakamura Osaka University training course
Dr. Koichiro Tamura Tokyo Metropolitan University training course, symposium
Dr. Tadashi Imanishi Biomedicinal Information Research Center, AIST training course, symposium
Dr. Saitou Naruya National Institute of Genetics training course
Korea
Dr. Sanghyuk Lee Korean Bioinformation Center training course, symposium
Dr. Dongsup Kim Korea Advanced Institute of Science and Technology training course, symposium
Dr. Daehee Hwang Pohang University of Science and Technology (POSTECH) training course, symposium
Dr. Sangsoo Kim Soongsil University training course, symposium

Program

Time Topic Address
Registration: Monday, April 19th, 2010
13:00-18:30 Check in Lecturers: Hope Hotel, 500 Zhaojiabang Road
Trainees: Zhongke Building, 319 Yueyang Road
18:30- Welcome reception (buffet) Floor3, 500 Zhaojiabang Road, Hope Hotel, Ban Dao buffet
Training Course Day 1: Tuesday, April 20th, 2010
07:30-08:45 Breakfast Hope Hotel, 500 Zhaojiabang Road
09:00-10:30 Lecture01: Predicting Biomolecular Interactions by Integrating Multiple Data Sources
Luonan Chen (SIBS, China)
Computer Room 2 (307-308), Zhongke Building
10:30-10:45 Break Lecturers: VIP room
10:45-12:15 Lecture 02: Evolutionary Genomics
Saitou Naruya (NIG, Japan)
Computer Room 2 (307-308), Zhongke Building
12:15-14:00 Lunch Shenji Soup Restaurant, Sheng Ai Building, Fl.2, No.88, North Caoxi Rd. (by Shuttle Bus
14:00-15:00 Lecture 03: Methods and Algorithms for Gene Prediction
Chaochun Wei (SJTU, China)
Computer Room 2 (307-308), Zhongke Building
15:00-16:00 Lecture 04: Molecular Phylogenetic Analyses using MEGA4
Koichiro Tamura (TMU, Japan)
Computer Room 2 (307-308), Zhongke Building
16:00-16:15 Break Lecturers: VIP room
16:15-17:15 Lecture 05: Towards biological interpretation of omics data: gene set analysis
Sanghyuk Lee (KOBIC, Korea)
Computer Room 2 (307-308), Zhongke Building
17:30-18:30 Dinner Haoxianglai Restaurant, 565 Zhaojiabang Rd. (5 minutes' walk)
Training Course Day 2: Wednesday, April 21st, 2010
07:30-08:45 Breakfast Fl. 3, 500 Zhaojiabang Road, Ban Dao buffet, Hope Hotel
09:00-10:30 Lecture 06: Structural Bioinformatics: Databases and Analyses
Haruki Nakamura (OU, Japan)
Computer Room 2 (307-308), Zhongke Building
10:30-10:45 Break Lecturers: VIP room
10:45-12:15 Lecture 07: Structural Bioinformatics
Dongsup Kim (KAIST, Korea)
Computer Room 2 (307-308), Zhongke Building
12:15-14:00 Lunch Shenji Soup Restaurant, Sheng Ai Building, Fl.2, No.88, North Caoxi Rd. (by Shuttle Bus)
14:00-15:00 Lecture 08: Genome-wide Association Study (GWAS)
Sangsoo Kim (SSU, Korea)
Computer Room 2 (307-308), Zhongke Building
15:00-16:00 Lecture 09: Using Databases in Bioinformatics
Tadashi Imanishi (BIRC, AIST, Japan)
Computer Room 2 (307-308), Zhongke Building
16:00-16:15 Break Lecturers: VIP room
16:15-17:15 Lecture 10: New Development in Sequencing Technologies and Their Applications
Xuan Li (SIBS, China)
Computer Room 2 (307-308), Zhongke Building
17:30-18:30 Dinner Haoxianglai Restaurant, 565 Zhaojiabang Rd. (5 minutes' walk)
Training Course Day 3: Thursday, April 22nd, 2010
07:30-08:45 Breakfast Fl. 3, 500 Zhaojiabang Road, Ban Dao buffet, Hope Hotel
09:00-10:30 Lecture 11: Bioinformatics for Proteomic Research
Daehee Hwang (POSTECH, Korea)
Computer Room 2 (307-308), Zhongke Building
10:30-10:45 Break Lecturers: VIP room
10:45-11:45 Lecture 12: Mass spectrometry Proteomics Bioinformatics
Aiping Lv (SIBS, China)
Computer Room 2 (307-308), Zhongke Building
11:45-12:15 Lecture 13: Introduction of Proteomics Software: pFind
Yan Fu(ICT,China)
Computer Room 2 (307-308), Zhongke Building
12:15-14:15 Lunch & Closing Ceremony Fl.5, No.100, Rd. Qinzhou, Shanghai Technology Innovation Center
Bioinformatics Symposium: Friday, April 23rd, 2010
07:30-08:45 Breakfast Fl. 3, 500 Zhaojiabang Road, Ban Dao buffet, Hope Hotel
Chair: Yixue Li (SIBS, China)
09:00-09:30 The Studies of Genome Network as the basis of Systems Biology
Takashi Gojobori (NIG, Japan)
Classroom 1 (203-204), Zhongke Building
09:30-10:00 Sanghyuk Lee (KOBIC, Korea)
10:00-10:30 Protein Structure and Function Prediction
Hongbin Shen (SJTU, China)
10:30-10:45 Break
10:45-11:15 Yoshio Tateno (NIG, Japan)
11:15-11:45 From Bioinformatics to Systems Biology: Case Studies
Yang Zhong (FU, China)
11:45-12:15 Sangsoo Kim (SSU, Korea)
12:15-14:00 Lunch Haoxianglai Restaurant, 565 Zhaojiabang Rd. (5 minutes' walk)
Chair: Takashi Gojobori (NIG, Japan)
14:00-14:30 Identification of Causative Variations
Yixue Li (SIBS, China)
Classroom 1 (203-204), Zhongke Building
14:30-15:00 Koichiro Tamura (TMU, Japan)
15:00-15:30 Daehee Hwang (POSTECH, Korea)
15:30-15:45 Break
15:45-16:15 Towards network-based computational biology
Luonan Chen (SIBS, China)
16:15-16:45 Dongsup Kim (KAIST, Korea)
16:45-17:15 Tadashi Imanishi (BIRC, AIST, Japan)
18:00-20:00 Dinner Lecturers: Qiupnig Tea Restaurant, 500 South Xiangyang Rd.
20:00-22:00 Discussion Coffee bar
Departure: Saturday, April 24th, 2010
Hotel check-out

Travel Information

Map

map1

A: Hope Hotel, 500 Zhaojiabang Rd, Shanghai
B: Zhongke Building,319 Yueyang Rd, Shanghai

Traffic

From Hong Qiao Airport:

Option 1: Bus No. 806 to Fenglin Road, then cross the bridge going north
Option 2: Take a taxi at the official TAXI stand (within 55 RMB)

From Pu Dong Airport:

Option 1: Airport Line Bus No. 3 to Wanping Road(S), then transfer to Fengling Road by Bus No. 43, 205 or 985
Option 2: Take a taxi at the official TAXI stand (140 to 160 RMB)

From Line 1 Metro Station:

20 minutes' walk after getting down at Hengshan Road Stop

From Line 7 or Line9 Metro Station:

15 minutes' walk after getting down at Zhaojiabang Road Stop

Public Buses:

Bus No. 42, 43, 49, 205, 218, 806, 927 or 931 to Fengling Road

map2

Haoxianglai Restaurant, 565 Zhaojiabang Rd. (5 minutes' walk form Zhongke Bldg)