An archived website by DDBJ: http://www.ddbj.nig.ac.jp/japan-korea/07.html
Announcement
We are pleased to announce that "The 7th Japan-Korea-China Bioinformatic Training Course" will be held at the International Center in Jeju University, Korea, in March 18-21, 2008. This time we will also organize a mini-symposium at which the lectureres of the training course talk about their original research topics. The trainees are expected to attend the mini-symposium, as well.
If you wish to participate in this training course as a trainee, please apply now (see below for application). The number of the trainees from Japan is limited to 10. The trainee is expected to be either a graduate student or a postdoc in bioinformatic or a related area who is fluent in English. In addition, the trainee is required to hold the passport which is valid for more than 6 months at the time of the training course. The deadline of the application is February 8, 2008. The successful applicant is covered with travel expenses including air and train tickets, lodging and meals. He/she is also provided with a PC linked with Internet during the course.
Outline
- Venue: International Center in Jeju University, Korea
- Dates: March 18th to March 21st, 2008
- Trainees: Ten trainees from each of the three countries, 30 in total
- Organizers
- Center for Information Biology and DDBJ (CIB-DDBJ) at the National Institute of Genetics (NIG)
- Korean BioInformation Center (KOBIC) at the Korea Research Institute of Bioscience and Biotechnology (KRIBB)
- Shanghai Center for Bioinformation Technology
- Supported by: Japan Science and Technology Agency (JST)
Lecturers
Korea
- Dr. Jong-Hwa Bhak (KOBIC)
- Dr. Sangsoo Kim (Soongsil U.)
- Dr. Namshin Kim (KOBIC)
Japan
- Dr. Yoshio Tateno (NIG)
- Dr. Takashi Gojobori (NIG)
- Dr. Naruya Saitou (NIG)
- Dr. Daron M. Standley (Osaka U.)
China
- Dr. Lei Liu (SCBIT)
- Dr. Yang Zhong (Funda U.)
- Dr. Lu Xie (SCBIT)
Program
Bioinformatics Training Course
March 18 (Tue), 2008 | ||
17:00-18:00 | Check-in and registration | |
18:00-18:10 | Opening Address | |
18:10-18:20 | Welcome Speech | |
18:30- | Reception | |
March 19 (Wed), 2008 | ||
-09:00 | Breakfast | |
09:00-11:00 | Fundamentals of Bioinformatics | Yoshio Tateno |
11:00-13:00 | Structural bioinformatics tools at the Protein Data Bank Japan | Daron M. Standley |
13:00-14:00 | Lunch | |
14:00-16:00 | Basic Mass Spectrometry Data Analysis in Proteomics | Lue XIE |
16:00-18:00 | Interactomics | Jone-Hwa Bhak |
18:30- | Dinner | |
March 20 (Thu), 2008 | ||
-09:00 | Breakfast | |
09:00-11:00 | Microarray Data Analysis | Lei LIU |
11:00-13:00 | Molecular Evolution | Yang ZHONG |
13:00-14:00 | Lunch | |
14:00-16:00 | Genome Annotation | Namshin Kim |
16:00-18:00 | Omics Data Integration Mining | Sangsoo Kim |
18:30- | Dinner | |
March 21 (Fri), 2008 | ||
-09:00 | Breakfast | |
09:00-11:00 | Evolutionary Geonmics | Takashi Gojobori |
11:00-13:00 | Some examples of evolutionary genomics study | Naruya Saitou |
13:00-14:00 | Lunch and Closing Ceremony |
Bioinformatics Conference: March 20 (Thu), 2008
Session | Time | Topic of Presentation | Speaker |
---|---|---|---|
1 | 10:00-10:30 | Functional annotation of structural genomics targets by sequence-weighted structure alignments | Daron M. Standley |
10:30-11:00 | Case studies of post-translational modification identification and prediction | Lu XIE | |
11:00-11:30 | Interaction network in biology | Jong-Hwa Bhak | |
11:30-11:40 | Coffee Break | ||
2 | 11:40-12:10 | Alternative Splicing and Comparative Studies | Namshin Kim |
12:10-12:40 | Sequence classification based on multidimensional scaling | Sangsoo Kim | |
12:40-13:10 | Comparison of network topology | Lei LIU | |
13:10-14:00 | Lunch | ||
3 | 14:00-14:30 | Evolution of nervous system | Takashi Gojobori |
14:30-15:00 | Construction of Tree of Life by Protein Domain Organizations | Yoshio Tateno | |
15:00-15:30 | Molecular phylogenetics based on multiple genes and genomic data | Yang ZHONG | |
15:30-16:00 | Evolution of highly conserved protein non-coding sequences in mammalian genomes | Naruya Saitou |